77e6dace01
Implement the BitBrain (Address Decoder Element + Sparse Binary Coincidence) classifier as a generic, deterministic Nim library under common_libs/bitbrain/, written from the published algorithm (Front. Neuroinform. 17:1125844), not from the GPL-3.0 reference C. - ade.nim: signed thresholded random projection (scale 64 / centre 127 defaults reproduce the reference), multi-width ADs, optional deterministic homeostatic threshold adaptation. Hebbian longevity and Metropolis-Hastings sampling are described but not implemented. - sbc.nim: packed class-bit coincidence memory; idempotent learn, counting inference. - bitbrain.nim: container over several ADs and SBCs, online learn/infer, argmax readout, memory accounting. - tests: 32 unit checks (idempotence, planted rule + monotone online curve, shuffled-label chance control, unseen input, homeostasis, memory). - tests/test_bitbrain_mnist.nim: loads the reference pretrained ADs/thresholds and MNIST from /tmp, reproduces the reference exactly - 97.210% corrected and 96.540% bug-compatible - confirming the port. No gun/wiring integration yet; inputs and outputs to be agreed separately.
254 lines
10 KiB
Nim
254 lines
10 KiB
Nim
## Unit / sanity tests for the generic BitBrain (ADE + SBC) library.
|
|
##
|
|
## No Java, no battles, no I/O: everything here is deterministic and seeded.
|
|
## Run:
|
|
## nim c -r --nimcache:/tmp/nc_j90 common_libs/tests/test_bitbrain.nim
|
|
##
|
|
## Covers:
|
|
## * ADE scoring / thresholding against a hand-computed example,
|
|
## * idempotent SBC learning (learn one sample 1000x -> identical memory),
|
|
## * a planted rule learned near-perfectly,
|
|
## * an online (incremental) learning curve that improves monotonically,
|
|
## * a shuffled-label control that degrades to chance,
|
|
## * correct, non-crashing behaviour on an unseen input,
|
|
## * homeostatic threshold adaptation moves the firing rate toward target.
|
|
|
|
import std/[random, math, strutils]
|
|
import bitbrain/ade
|
|
import bitbrain/sbc
|
|
import bitbrain/bitbrain
|
|
|
|
var checks = 0
|
|
var failures = 0
|
|
proc check(name: string, ok: bool) =
|
|
inc checks
|
|
if ok: echo "PASS: ", name
|
|
else: echo "FAIL: ", name; inc failures
|
|
|
|
proc randInput(rng: var Rand, n: int): seq[int] =
|
|
result = newSeq[int](n)
|
|
for i in 0 ..< n:
|
|
result[i] = rng.rand(255)
|
|
|
|
# ── 1. ADE scoring / thresholding ────────────────────────────────────────────
|
|
|
|
proc testAdeScoring() =
|
|
# One ADE with synapses: +index 2 (code +3), -index 0 (code -1).
|
|
var ad = initAddressDecoder(1, 2, scale = 1, center = 127)
|
|
ad.codes[0] = 3 # +1 * (2 + 1): position 2, excitatory
|
|
ad.codes[1] = -1 # -1 * (0 + 1): position 0, inhibitory
|
|
let input = @[10, 0, 200] # raw = (200-127) - (10-127) = 73 + 117 = 190
|
|
check "ADE hand-computed score is 190", ad.score(input, 0) == 190
|
|
ad.thresholds[0] = 190
|
|
check "ADE fires at score == threshold (>= comparison)", ad.fires(input, 0)
|
|
ad.thresholds[0] = 191
|
|
check "ADE does not fire one above score", not ad.fires(input, 0)
|
|
|
|
# Two-ADE active list.
|
|
var ad2 = initAddressDecoder(3, 1, scale = 1, center = 0)
|
|
ad2.codes = @[1'i32, 2'i32, 3'i32] # positions 0,1,2, all excitatory
|
|
ad2.thresholds = @[5'i32, 5'i32, 5'i32]
|
|
var active: seq[int32]
|
|
ad2.activeList(@[10, 1, 10], active)
|
|
check "active list picks exactly the firing ADEs", active == @[0'i32, 2'i32]
|
|
|
|
# ── 2. Idempotent SBC learning ───────────────────────────────────────────────
|
|
|
|
proc testIdempotentLearning() =
|
|
var s = initSbc(64, 5)
|
|
let row = @[1'i32, 3'i32, 7'i32]
|
|
let col = @[2'i32, 4'i32]
|
|
let firstAdded = s.learn(row, col, 2)
|
|
check "first learn sets 3*2 = 6 bits", firstAdded == 6
|
|
let snapshot = s.bits
|
|
var allNoop = true
|
|
for _ in 0 ..< 1000:
|
|
if s.learn(row, col, 2) != 0: allNoop = false
|
|
check "learning the same sample 1000x is a no-op", allNoop
|
|
check "memory is bit-identical after 1000 repeats", s.bits == snapshot
|
|
|
|
# Setting a *different* class bit is still new information.
|
|
check "a different class sets new bits", s.learn(row, col, 3) == 6
|
|
check "learned bit is readable", s.bitAt(1, 2, 3)
|
|
check "unlearned bit is clear", not s.bitAt(1, 2, 4)
|
|
|
|
# ── 3. Synthetic planted-rule dataset ────────────────────────────────────────
|
|
|
|
const
|
|
SynthInputWidth = 32
|
|
SynthClasses = 4
|
|
SynthBlock = 8 # positions owned by each class
|
|
SynthHot = 4 # of the 8 block positions set per sample
|
|
|
|
proc synthSample(rng: var Rand, cls: int): seq[int] =
|
|
## Input is zero everywhere except `SynthHot` randomly chosen positions inside
|
|
## class `cls`'s block, set to 255. The class rules are disjoint in position
|
|
## space, so a rule of "which positions are hot" is perfectly learnable.
|
|
result = newSeq[int](SynthInputWidth)
|
|
var poss: seq[int]
|
|
for p in 0 ..< SynthBlock:
|
|
poss.add cls * SynthBlock + p
|
|
rng.shuffle(poss)
|
|
for k in 0 ..< SynthHot:
|
|
result[poss[k]] = 255
|
|
|
|
proc synthAd(nAde: int, rng: var Rand): AddressDecoder =
|
|
## All-excitatory width-2 ADEs that fire iff *both* sampled positions are hot
|
|
## (score 2*255 == threshold 510).
|
|
result = initRandomAddressDecoder(nAde, 2, SynthInputWidth, rng,
|
|
scale = 1, center = 0, threshold = 510)
|
|
for k in 0 ..< result.codes.len:
|
|
result.codes[k] = abs(result.codes[k])
|
|
|
|
proc synthBrain(nAde: int, seed: int64): BitBrain =
|
|
var rng = initRand(seed)
|
|
var ades: seq[AddressDecoder]
|
|
for _ in 0 ..< 3: # a few ADs -> several cross SBCs
|
|
ades.add synthAd(nAde, rng)
|
|
initBitBrain(ades, crossPairs(ades.len), SynthClasses)
|
|
|
|
proc accuracy(bb: var BitBrain, xs: seq[seq[int]], ys: seq[int]): float =
|
|
var right = 0
|
|
for i in 0 ..< xs.len:
|
|
if bb.infer(xs[i]).label == ys[i]:
|
|
inc right
|
|
result = float(right) / float(xs.len)
|
|
|
|
proc makeSynthSet(n: int, seed: int64): (seq[seq[int]], seq[int]) =
|
|
var rng = initRand(seed)
|
|
for i in 0 ..< n:
|
|
let cls = i mod SynthClasses
|
|
result[0].add synthSample(rng, cls)
|
|
result[1].add cls
|
|
|
|
proc testPlantedRuleAndOnlineCurve() =
|
|
var bb = synthBrain(256, seed = 20240924)
|
|
var (testX, testY) = makeSynthSet(400, seed = 777)
|
|
var (trainX, trainY) = makeSynthSet(600, seed = 111)
|
|
|
|
# Incremental online learning: accuracy on held-out data must not go backwards
|
|
# as samples arrive.
|
|
var accs: seq[float]
|
|
for i in 0 ..< trainX.len:
|
|
bb.learn(trainX[i], trainY[i])
|
|
if (i + 1) mod 50 == 0:
|
|
accs.add accuracy(bb, testX, testY)
|
|
|
|
for i in 1 ..< accs.len:
|
|
check "online accuracy is monotone at checkpoint " & $((i + 1) * 50) &
|
|
" (" & formatFloat(accs[i - 1], ffDecimal, 3) & " -> " &
|
|
formatFloat(accs[i], ffDecimal, 3) & ")",
|
|
accs[i] >= accs[i - 1]
|
|
check "planted rule is learned near-perfectly (" &
|
|
formatFloat(accs[^1], ffDecimal, 3) & " >= 0.95)",
|
|
accs[^1] >= 0.95
|
|
|
|
# ── 4. Shuffled-label control ────────────────────────────────────────────────
|
|
|
|
proc testShuffledControl() =
|
|
var bb = synthBrain(256, seed = 99)
|
|
var (trainX, _) = makeSynthSet(3000, seed = 5)
|
|
var (testX, testY) = makeSynthSet(400, seed = 6)
|
|
var rng = initRand(4242)
|
|
var shufY = newSeq[int](trainX.len)
|
|
for i in 0 ..< trainX.len:
|
|
shufY[i] = rng.rand(SynthClasses - 1)
|
|
for i in 0 ..< trainX.len:
|
|
bb.learn(trainX[i], shufY[i])
|
|
let acc = accuracy(bb, testX, testY)
|
|
check "shuffled-label control is near chance (" &
|
|
formatFloat(acc, ffDecimal, 3) & " <= 0.45, chance = 0.25)",
|
|
acc <= 0.45
|
|
|
|
# ── 5. Unseen input ──────────────────────────────────────────────────────────
|
|
|
|
proc testUnseenInput() =
|
|
var bb = synthBrain(128, seed = 33)
|
|
var (trainX, trainY) = makeSynthSet(400, seed = 44)
|
|
for i in 0 ..< trainX.len:
|
|
bb.learn(trainX[i], trainY[i])
|
|
let blank = newSeq[int](SynthInputWidth)
|
|
let r = bb.infer(blank)
|
|
var total = 0
|
|
for c in r.counts: total += c
|
|
check "unseen all-zero input fires no ADE and has zero counts", total == 0
|
|
check "unseen all-zero input still returns a valid class",
|
|
r.label >= 0 and r.label < SynthClasses
|
|
# A single hot position inside a class block should not crash and should
|
|
# produce valid counts.
|
|
var rng = initRand(1)
|
|
var one = newSeq[int](SynthInputWidth)
|
|
one[3 * SynthBlock + 2] = 255
|
|
let r2 = bb.infer(one)
|
|
check "unseen partial input returns a valid class/counts",
|
|
r2.label >= 0 and r2.label < SynthClasses and r2.counts.len == SynthClasses
|
|
|
|
# ── 6. Homeostatic threshold adaptation ──────────────────────────────────────
|
|
proc testHomeostasis() =
|
|
var rng = initRand(7)
|
|
const N = 64
|
|
const Interval = 400
|
|
const Target = 0.10
|
|
|
|
# All thresholds so high nothing fires -> controller must lower them.
|
|
var hot = initRandomAddressDecoder(N, 4, 200, rng, scale = 1, center = 127,
|
|
threshold = 100_000)
|
|
var cold = initRandomAddressDecoder(N, 4, 200, rng, scale = 1, center = 127,
|
|
threshold = -100_000)
|
|
# A naturally-initialised AD (threshold 0) is used to test convergence.
|
|
var mid = initRandomAddressDecoder(N, 4, 200, rng, scale = 1, center = 127,
|
|
threshold = 0)
|
|
for round in 0 ..< 300:
|
|
for _ in 0 ..< Interval:
|
|
let x = randInput(rng, 200)
|
|
hot.accumulateFiring(x)
|
|
cold.accumulateFiring(x)
|
|
mid.accumulateFiring(x)
|
|
hot.adaptThresholds(Interval, Target, step = 5)
|
|
cold.adaptThresholds(Interval, Target, step = 5)
|
|
mid.adaptThresholds(Interval, Target, step = 5)
|
|
check "too-cold thresholds are driven down", hot.thresholds[0] < 100_000
|
|
check "too-hot thresholds are driven up", cold.thresholds[0] > -100_000
|
|
|
|
# Measure the converged firing rate of the naturally-initialised AD.
|
|
var fired = 0
|
|
for _ in 0 ..< 2000:
|
|
fired += mid.fireCount(randInput(rng, 200))
|
|
let rate = float(fired) / float(2000 * N)
|
|
check "mid AD converges near the 10% target (got " &
|
|
formatFloat(rate, ffDecimal, 3) & ")",
|
|
rate > 0.05 and rate < 0.20
|
|
|
|
# ── 7. Memory accounting ─────────────────────────────────────────────────────
|
|
|
|
proc testMemoryAccounting() =
|
|
# A gun-sized configuration: 4 ADs x 512 ADEs, widths {6,8,10,12}, 6 SBCs,
|
|
# 8 classes. SBC tensors dominate: 6 * 512*512*8 bits = 1,572,864 bytes.
|
|
var ades: seq[AddressDecoder]
|
|
var rng = initRand(1)
|
|
for w in [6, 8, 10, 12]:
|
|
ades.add initRandomAddressDecoder(512, w, 256, rng)
|
|
let bb = initBitBrain(ades, crossPairs(4), 8)
|
|
check "gun-sized SBC memory = 1,572,864 bytes",
|
|
bb.sbcMemoryBytes == 1_572_864
|
|
check "gun-sized total model = SBC + AD codes/thresholds",
|
|
bb.memoryBytes > bb.sbcMemoryBytes
|
|
# The SBC tensor is exactly nAde*nAde*nClasses bits, rounded up to uint32.
|
|
check "SBC tensor bit count is exact",
|
|
bb.sbcMemoryBytes * 8 == 6 * 512 * 512 * 8
|
|
|
|
# ── driver ───────────────────────────────────────────────────────────────────
|
|
|
|
testAdeScoring()
|
|
testIdempotentLearning()
|
|
testPlantedRuleAndOnlineCurve()
|
|
testShuffledControl()
|
|
testUnseenInput()
|
|
testHomeostasis()
|
|
testMemoryAccounting()
|
|
|
|
echo "\n", checks, " checks, ", failures, " failure(s)"
|
|
if failures > 0:
|
|
quit(1)
|
|
echo "All bitbrain sanity checks passed."
|